{
  "_id": "6a6077a214e95619b75da032",
  "Package": "c060",
  "Version": "0.5-0",
  "Date": "2026-03-24",
  "Authors@R": "c(person(given = \"Martin\",\nfamily = \"Sill\",\nrole = \"aut\"),\nperson(given = \"Thomas\",\nfamily = \"Hielscher\",\nrole = \"aut\"),\nperson(given = \"Manuela\",\nfamily = \"Zucknick\",\nrole = \"aut\"),\nperson(given = \"Natalia\",\nfamily = \"Becker\",\nrole = \"aut\"),\nperson(given = \"Frederic\",\nfamily = \"Bertrand\",\nrole = \"cre\",\nemail = \"frederic.bertrand@lecnam.net\",\ncomment = c(ORCID = \"0000-0002-0837-8281\"))\n)",
  "Maintainer": "Frederic Bertrand <frederic.bertrand@lecnam.net>",
  "Title": "Extended Inference for Lasso and Elastic-Net Regularized Cox and\nGeneralized Linear Models",
  "Description": "The c060 package provides additional functions to perform\nstability selection, model validation and parameter tuning for\nglmnet models.",
  "License": "GPL-2",
  "LazyLoad": "yes",
  "NeedsCompilation": "no",
  "URL": "https://fbertran.github.io/c060/, https://github.com/fbertran/c060",
  "BugReports": "https://github.com/fbertran/c060/issues",
  "Config/testthat/edition": "3",
  "RoxygenNote": "7.3.3",
  "Encoding": "UTF-8",
  "Repository": "https://fbertran.r-universe.dev",
  "Date/Publication": "2026-03-24 20:25:57 UTC",
  "RemoteUrl": "https://github.com/fbertran/c060",
  "RemoteRef": "HEAD",
  "RemoteSha": "c6d5958680df26c833b369616c913a01764865a5",
  "Packaged": {
    "Date": "2026-07-22 07:53:14 UTC",
    "User": "root"
  },
  "Author": "Martin Sill [aut],\nThomas Hielscher [aut],\nManuela Zucknick [aut],\nNatalia Becker [aut],\nFrederic Bertrand [cre] (ORCID:\n<https://orcid.org/0000-0002-0837-8281>)",
  "_user": "fbertran",
  "_type": "src",
  "_file": "c060_0.5-0.tar.gz",
  "_fileid": "https://r2.ropensci.org/27b0c60dcf2761ef5edb0858619efcc1a221874e759df4d598c643d2fa1f93b8",
  "_filesize": 540035,
  "_sha256": "27b0c60dcf2761ef5edb0858619efcc1a221874e759df4d598c643d2fa1f93b8",
  "_expires": "2026-10-30T07:56:15.000Z",
  "_created": "2026-07-22T07:53:14.000Z",
  "_published": "2026-07-22T07:56:17.909Z",
  "_jobs": [
    {
      "job": 88864238824,
      "time": 139,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8522267014"
    },
    {
      "job": 88864238862,
      "time": 137,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8522266573"
    },
    {
      "job": 88864238946,
      "time": 116,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8522257799"
    },
    {
      "job": 88864238850,
      "time": 137,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8522266543"
    },
    {
      "job": 88863672852,
      "time": 169,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8522209550"
    },
    {
      "job": 88864238817,
      "time": 105,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8522252740"
    },
    {
      "job": 88864238859,
      "time": 91,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8522247332"
    },
    {
      "job": 88864238838,
      "time": 90,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8522246973"
    },
    {
      "job": 88864238826,
      "time": 105,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8522252741"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253",
  "_status": "success",
  "_upstream": "https://github.com/fbertran/c060",
  "_commit": {
    "id": "c6d5958680df26c833b369616c913a01764865a5",
    "author": "Frederic Bertrand <frederic.bertrand@lecnam.net>",
    "committer": "Frederic Bertrand <frederic.bertrand@lecnam.net>",
    "message": "Code fix to implement backward compatibility\n",
    "time": 1774383957
  },
  "_maintainer": {
    "name": "Frederic Bertrand",
    "email": "frederic.bertrand@lecnam.net",
    "login": "fbertran",
    "orcid": "0000-0002-0837-8281",
    "twitter": "@BertrandFrdric2",
    "description": "Full professor in statistical modelling and data science at the CNAM Paris, France",
    "uuid": 6714333
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "glmnet",
      "role": "Imports"
    },
    {
      "package": "survival",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "mlegp",
      "role": "Imports"
    },
    {
      "package": "tgp",
      "role": "Imports"
    },
    {
      "package": "pamr",
      "role": "Imports"
    },
    {
      "package": "peperr",
      "role": "Imports"
    },
    {
      "package": "penalized",
      "role": "Imports"
    },
    {
      "package": "penalizedSVM",
      "role": "Imports"
    },
    {
      "package": "lattice",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "withr",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "fbertran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-38",
      "n": 1
    },
    {
      "week": "2025-39",
      "n": 1
    },
    {
      "week": "2026-13",
      "n": 3
    }
  ],
  "_tags": [],
  "_stars": 3,
  "_contributors": [
    {
      "user": "fbertran",
      "count": 12,
      "uuid": 6714333
    }
  ],
  "_userbio": {
    "uuid": 6714333,
    "type": "user",
    "name": "Frederic Bertrand",
    "followers": 43,
    "description": "Full professor in statistical modelling and data science at the CNAM Paris, France"
  },
  "_downloads": {
    "count": 291,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/c060"
  },
  "_mentions": 4,
  "_devurl": "https://github.com/fbertran/c060",
  "_pkgdown": "https://fbertran.github.io/c060/",
  "_searchresults": 48,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/c060.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/fbertran/c060",
  "_realowner": "fbertran",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.2",
      "date": "2013-04-16"
    },
    {
      "version": "0.2-3",
      "date": "2014-01-22"
    },
    {
      "version": "0.2-4",
      "date": "2014-12-11"
    },
    {
      "version": "0.2-5",
      "date": "2019-11-29"
    },
    {
      "version": "0.2-6",
      "date": "2021-03-01"
    },
    {
      "version": "0.2-7",
      "date": "2021-03-16"
    },
    {
      "version": "0.2-8",
      "date": "2021-10-06"
    },
    {
      "version": "0.2-9",
      "date": "2022-03-03"
    },
    {
      "version": "0.3-0",
      "date": "2023-03-23"
    },
    {
      "version": "0.3-1",
      "date": "2025-08-18"
    },
    {
      "version": "0.4-0",
      "date": "2025-09-19"
    },
    {
      "version": "0.5-0",
      "date": "2026-03-24"
    }
  ],
  "_exports": [
    "aggregation.auc",
    "balancedFolds",
    "complexity.glmnet",
    "EPSGO",
    "fit.glmnet",
    "PLL.coxnet",
    "Plot.coef.glmnet",
    "Plot.peperr.curves",
    "stabpath",
    "stabsel",
    "tune.glmnet.interval"
  ],
  "_help": [
    {
      "page": "aggregation.auc",
      "title": "Determine the area under the ROC curve for a fitted model",
      "topics": [
        "aggregation.auc"
      ]
    },
    {
      "page": "balancedFolds",
      "title": "Function producing stratified/ balanced folds for cross validation",
      "topics": [
        "balancedFolds"
      ]
    },
    {
      "page": "coef.sum.intsearch",
      "title": "Get coefficients for a model",
      "topics": [
        "coef.sum.intsearch"
      ]
    },
    {
      "page": "complexity.glmnet",
      "title": "Interface for determination of penalty lambda in penalized regression model via cross-validation",
      "topics": [
        "complexity.glmnet"
      ]
    },
    {
      "page": "EPSGO",
      "title": "Efficient Parameter Selection via Global Optimization",
      "topics": [
        "EPSGO"
      ]
    },
    {
      "page": "fit.glmnet",
      "title": "Interface function for fitting a penalized regression model with 'glmnet'",
      "topics": [
        "fit.glmnet"
      ]
    },
    {
      "page": "PLL.coxnet",
      "title": "Predictive partial log-likelihood for glmnet Cox PH model fit",
      "topics": [
        "PLL.coxnet"
      ]
    },
    {
      "page": "Plot.coef.glmnet",
      "title": "function to highlight the path of a pre-specified set of variables within the coefficient path",
      "topics": [
        "Plot.coef.glmnet"
      ]
    },
    {
      "page": "Plot.peperr.curves",
      "title": "Plot method for prediction error curves of a peperr object",
      "topics": [
        "Plot.peperr.curves"
      ]
    },
    {
      "page": "plot.stabpath",
      "title": "function to plot a stability path",
      "topics": [
        "plot.stabpath"
      ]
    },
    {
      "page": "plot.sum.intsearc",
      "title": "Plot Summary object for interval search models",
      "topics": [
        "plot.sum.intsearc",
        "plot.sum.intsearch"
      ]
    },
    {
      "page": "predictProb.coxnet",
      "title": "Extract predicted survival probabilities from a glmnet fit",
      "topics": [
        "predictProb.coxnet",
        "predictProb.glmnet"
      ]
    },
    {
      "page": "stabpath",
      "title": "Stability path for glmnet models",
      "topics": [
        "stabpath"
      ]
    },
    {
      "page": "stabsel",
      "title": "function to estimate a stable set of variables",
      "topics": [
        "stabsel"
      ]
    },
    {
      "page": "summary.intsearch",
      "title": "Summary method for interval search models",
      "topics": [
        "summary.intsearch"
      ]
    },
    {
      "page": "tune.glmnet.interval",
      "title": "Wrapper function for 'glmnet' objects.",
      "topics": [
        "tune.glmnet.interval"
      ]
    }
  ],
  "_readme": "https://github.com/fbertran/c060/raw/HEAD/README.md",
  "_rundeps": [
    "class",
    "cluster",
    "codetools",
    "corpcor",
    "e1071",
    "foreach",
    "glmnet",
    "iterators",
    "lattice",
    "maptree",
    "MASS",
    "Matrix",
    "mlegp",
    "pamr",
    "penalized",
    "penalizedSVM",
    "peperr",
    "proxy",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "rpart",
    "shape",
    "snow",
    "snowfall",
    "statmod",
    "survival",
    "tgp"
  ],
  "_score": 4.936513742478893,
  "_indexed": true,
  "_nocasepkg": "c060",
  "_universes": [
    "fbertran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5-0",
      "date": "2026-07-22T07:55:19.000Z",
      "distro": "resolute",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/82da9b9df55f694355c0007e828807171ea33af90ad9b2c89b80ca5ae9acad09",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5-0",
      "date": "2026-07-22T07:55:18.000Z",
      "distro": "resolute",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/23ee7a4bcde9f9fb4ad0ba2b717d3c94618c95a7b3634dd8ad4aa858e027a450",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5-0",
      "date": "2026-07-22T07:54:58.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/b5434a678345e756285c175b7f1bdc8eabdd4ff274cdbd65206d872b4082a0a9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.5-0",
      "date": "2026-07-22T07:55:18.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/1069caff831a2880ec0686914e55334c6b589b91d1fea6dd97b8acb4271452c9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5-0",
      "date": "2026-07-22T07:55:15.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/6a43376805fe3d31c77f24d810729128fac8420d7c59f7d5fad766c8c311d55f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5-0",
      "date": "2026-07-22T07:54:23.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/f70727f3eeb4293beaec6fa9ad6ec629c40b682d9cdd766bbad3c53737f3ce95",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.5-0",
      "date": "2026-07-22T07:54:21.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/3a7e51cfe27bdf9f43824fb1aeb43c99b440ac9e2a8ad7fcf1cdf77361a45324",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.5-0",
      "date": "2026-07-22T07:54:40.000Z",
      "commit": "c6d5958680df26c833b369616c913a01764865a5",
      "fileid": "https://r2.ropensci.org/278ba1aadc635ff6ab973e53eedbaf57a8d758baf911ded11d7a90e24ab5208b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fbertran/actions/runs/29901681253"
    }
  ]
}