{ "_id": "6a37a0d33efcd9bda44204fe", "Package": "penalizedSVM", "Type": "Package", "Title": "Feature Selection SVM using Penalty Functions", "Version": "1.2.0", "Date": "2025-09-15", "Authors@R": "c(person(given = \"Natalia\",\nfamily = \"Becker\",\nrole = \"aut\"),\nperson(given = \"Wiebke\",\nfamily = \"Werft\",\nrole = \"aut\"),\nperson(given = \"Axel\",\nfamily = \"Benner\",\nrole = \"aut\"),\nperson(given = \"Frederic\",\nfamily = \"Bertrand\",\nrole = \"cre\",\nemail = \"frederic.bertrand@lecnam.net\"))", "Author": "Natalia Becker [aut], Wiebke Werft [aut], Axel Benner [aut],\nFrederic Bertrand [cre]", "Maintainer": "Frederic Bertrand ", "Description": "Support Vector Machine (SVM) classification with\nsimultaneous feature selection using penalty functions is\nimplemented. The smoothly clipped absolute deviation (SCAD),\n'L1-norm', 'Elastic Net' ('L1-norm' and 'L2-norm') and 'Elastic\nSCAD' (SCAD and 'L2-norm') penalties are available. The tuning\nparameters can be found using either a fixed grid or a interval\nsearch.", "License": "GPL (>= 2)", "LazyLoad": "yes", "RoxygenNote": "6.0.1", "Config/testthat/edition": "3", "URL": "https://github.com/fbertran/penalizedSVM,\nhttps://fbertran.github.io/penalizedSVM", "BugReports": "https://github.com/fbertran/penalizedSVM/issues", "Repository": "https://fbertran.r-universe.dev", "Date/Publication": "2025-09-14 22:07:49 UTC", "RemoteUrl": "https://github.com/fbertran/penalizedsvm", "RemoteRef": "HEAD", "RemoteSha": "333e55010fc1ab3e7e37628647de51d31e0d6800", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-21 08:26:48 UTC", "User": "root" }, "MD5sum": "7bee7d1b3aa59bd3a4f141ca62d51b94", "_user": "fbertran", "_type": "src", "_file": "penalizedSVM_1.2.0.tar.gz", "_fileid": "3bb2d3109e0fd3a8896c1d278a83f37fb8981a5bbe96d8a29c623afd7dc460dc", "_filesize": 260600, "_sha256": "3bb2d3109e0fd3a8896c1d278a83f37fb8981a5bbe96d8a29c623afd7dc460dc", "_created": "2026-06-21T08:26:48.000Z", "_published": "2026-06-21T08:29:07.686Z", "_distro": "noble", "_jobs": [ { "job": 82554729782, "time": 93, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7773452856" }, { "job": 82554729776, "time": 110, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7773454835" }, { "job": 82554729753, "time": 88, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7773452144" }, { "job": 82554729749, "time": 76, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7773450871" }, { "job": 82554573902, "time": 155, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7773441808" }, { "job": 82554729751, "time": 97, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7773453329" }, { "job": 82554729763, "time": 71, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7773450192" }, { "job": 82554729768, "time": 71, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7773450101" }, { "job": 82554729765, "time": 87, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7773452855" } ], "_buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/fbertran/penalizedsvm", "_commit": { "id": "333e55010fc1ab3e7e37628647de51d31e0d6800", "author": "Frederic Bertrand ", "committer": "Frederic Bertrand ", "message": "Add pkgdown website\nAdd doi\nFix description file\n", "time": 1757887669 }, "_maintainer": { "name": "Frederic Bertrand", "email": "frederic.bertrand@lecnam.net", "login": "fbertran", "twitter": "@BertrandFrdric2", "description": "Full professor in statistical modelling and data science at the CNAM Paris, France", "uuid": 6714333 }, "_registered": true, "_dependencies": [ { "package": "e1071", "role": "Depends" }, { "package": "mlegp", "role": "Depends" }, { "package": "MASS", "role": "Depends" }, { "package": "corpcor", "role": "Imports" }, { "package": "statmod", "role": "Imports" }, { "package": "tgp", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "fbertran", "_selfowned": true, "_usedby": 2, "_updates": [ { "week": "2025-37", "n": 1 } ], "_tags": [], "_stars": 1, "_contributors": [ { "user": "fbertran", "count": 5, "uuid": 6714333 } ], "_userbio": { "uuid": 6714333, "type": "user", "name": "Frederic Bertrand", "followers": 43, "description": "Full professor in statistical modelling and data science at the CNAM Paris, France" }, "_downloads": { "count": 700, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/penalizedSVM" }, "_mentions": 1, "_devurl": "https://github.com/fbertran/penalizedsvm", "_pkgdown": "https://fbertran.github.io/penalizedSVM", "_searchresults": 94, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/penalizedSVM.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/fbertran/penalizedsvm", "_realowner": "fbertran", "_cranurl": true, "_releases": [ { "version": "1.0", "date": "2009-01-14" }, { "version": "1.1", "date": "2012-10-29" }, { "version": "1.1.1", "date": "2018-07-21" }, { "version": "1.1.2", "date": "2018-07-26" }, { "version": "1.1.3", "date": "2022-05-11" }, { "version": "1.1.4", "date": "2023-03-23" }, { "version": "1.2.0", "date": "2025-09-15" } ], "_exports": [ ".plot.EPSGO.parms", "Direct", "DrHSVM", "EPSGO", "ExpImprovement", "findgacv.scad", "lpsvm", "predict.penSVM", "print.penSVM", "scad_L2.svc", "scadsvc", "sim.data", "sortmat", "svmfs", "svmfs.default" ], "_help": [ { "page": "penalizedSVM-package", "title": "Feature Selection SVM using Penalty Functions", "topics": [ "penalizedSVM-package", "penalizedSVM" ] }, { "page": "plot.EPSGO.parms", "title": "Plot Interval Search Plot Visited Points and the Q Values.", "topics": [ ".plot.EPSGO.parms" ] }, { "page": "EPSGO", "title": "Fits SVM with variable selection using penalties.", "topics": [ "Direct", "EPSGO", "ExpImprovement" ] }, { "page": "findgacv.scad", "title": "Calculate Generalized Approximate Cross Validation Error Estimation for SCAD SVM model", "topics": [ "findgacv.scad" ] }, { "page": "svm.1norm", "title": "Fit L1-norm SVM", "topics": [ "lpsvm" ] }, { "page": "predict", "title": "Predict Method for Feature Selection SVM", "topics": [ "predict.penSVM" ] }, { "page": "print", "title": "Print Function for FS SVM", "topics": [ "print.penSVM" ] }, { "page": "scadsvc", "title": "Fit SCAD SVM model", "topics": [ "scadsvc" ] }, { "page": "simulate.data", "title": "Simulation of microarray data", "topics": [ "sim.data" ] }, { "page": "sortmat", "title": "Sort matrix or data frame", "topics": [ "sortmat" ] }, { "page": "svmfs", "title": "Fits SVM with variable selection using penalties.", "topics": [ "DrHSVM", "scad_L2.svc", "svmfs", "svmfs.default" ] } ], "_readme": "https://github.com/fbertran/penalizedsvm/raw/HEAD/README.md", "_rundeps": [ "class", "cluster", "corpcor", "e1071", "maptree", "MASS", "mlegp", "proxy", "rpart", "statmod", "tgp" ], "_score": 4.450249108319361, "_indexed": true, "_nocasepkg": "penalizedsvm", "_universes": [ "fbertran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.2.0", "date": "2026-06-21T08:28:23.000Z", "distro": "noble", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "3183763578ffda237adf5c112d1b879770fc47840ee8d808637c46b90ecb3513", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.6.0", "os": "linux", "version": "1.2.0", "date": "2026-06-21T08:28:39.000Z", "distro": "noble", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "2443c5f5dbafd07d469d1c5152a5819215a0aec76ae206dc105703a8ac3af6d8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.5.3", "os": "mac", "version": "1.2.0", "date": "2026-06-21T08:28:18.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "4050d0fe54777a5e99cc2a870b03f9032621b96babbba198dca4d8afc428b812", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.6.0", "os": "mac", "version": "1.2.0", "date": "2026-06-21T08:28:11.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "b9dd366d9c58684d2ed664c2db3a81f8948007d3a04c974296d1f60d7630f3c4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.6.0", "os": "wasm", "version": "1.2.0", "date": "2026-06-21T08:28:40.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "ba0e425dfbcd9c2bceaea7bed562ba25dbe391486e350fbaf85c0162c2abb0e4", "status": "success", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.7.0", "os": "win", "version": "1.2.0", "date": "2026-06-21T08:27:53.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "794c685ea2e1d33576c0729aa6f174a003e78c83e51dffaec25aeca7ff174899", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.5.3", "os": "win", "version": "1.2.0", "date": "2026-06-21T08:27:52.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "a3bf231e65c2646e047eb2a235f63545dc8511ebf500913f1c83e4e617589173", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" }, { "r": "4.6.0", "os": "win", "version": "1.2.0", "date": "2026-06-21T08:28:09.000Z", "commit": "333e55010fc1ab3e7e37628647de51d31e0d6800", "fileid": "d0eb55a4cf27b45a6aaf4404512f7a290a1dd35dae1ea0697f63003baf700ee7", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/fbertran/actions/runs/27898568252" } ] }